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MUSCLE
 
 
 
 
 
USEARCH  
Operating system Processor Bits Executable file
Linux Intel i86 32 muscle3.8.31_i86linux32.tar.gz
Linux Intel i86 64 muscle3.8.31_i86linux64.tar.gz
Mac OSX Intel i86 32 muscle3.8.31_i86darwin32.tar.gz
Mac OSX Intel i86 64 muscle3.8.31_i86darwin64.tar.gz
Mac  PPC 64 muscle3.8.31_macppc.tar.gz
Windows Intel i86 32 muscle3.8.31_i86win32.exe
Windows/Cygwin Intel i86 32 muscle3.8.31_i86cygwin32.exe

Files are in tarball format. Use tar -zxvf filename to extract.

See also
Older versions
muscle3.8.425_binaries.tar.gz (with bug fix for long sequences).
muscle3.8.425_src.tar.gz (Source for v3.8.425).